The tutorials are provided as Jupyter notebooks in the tutorials/ directory of the repository.
| Notebook | Description |
|---|---|
| 01 - Basic MIOFlow | Basic workflow and getting started |
| 01 - Colab Version | Google Colab version of the basic tutorial |
| 02 - Growth and Death | Modeling cell growth and death dynamics |
| 03 - Spatial Features | Incorporating spatial features |
| 04 - Momentum Guidance | Momentum-guided trajectory inference |
| 05 - Neural SDE | Neural stochastic differential equation variant |
| 06 - Trajectory Exploration | Exploring and visualizing trajectories |